Life Science and Technology Building (61) 1F 61108
Research Interest
Bioinformatics,
Data Mining,
Machine Learning
Education
2003 Bachelor of Science in Biochemistry (B.S.), University of Madras
2006 Master of Science in Bioinformatics (M.S.), University of Madras
2011 Doctorate in Computational Biology (Ph.D.), Ajou University
Experience
November 2011 ~ February 2017: Research fellow, Korea Institute for Advanced Study
March 2017 ~ February 2022: Research Assistant Professor, Ajou University School of Medicine
Feb 21, 2022 ~ Present: Assistant Professor, Dept of Integrative Biotechnology, Sungkyunkwan University
Journal Articles
(2025)
Mulaqua: An Interpretable Multimodal Deep Learning Framework for Identifying PMT/vPvM substances in Drinking Water.
JOURNAL OF HAZARDOUS MATERIALS.
140573,
140568
(2025)
HyPepTox-Fuse: An interpretable hybrid framework for accurate peptide toxicity prediction fusing protein language model-based embeddings with conventional descriptors.
JOURNAL OF PHARMACEUTICAL ANALYSIS.
15,
8
(2025)
xBitterT5: an explainable transformer-based framework with multimodal inputs for identifying bitter-taste peptides.
JOURNAL OF CHEMINFORMATICS.
17,
127
(2025)
XMolCap: Advancing Molecular Captioning through Multimodal Fusion and Explainable Graph Neural Networks.
IEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS.
1,
1
(2025)
Decision making based ensemble feature selection approach through a new score function in q-rung orthopair hesitant fuzzy environment.
MATHEMATICS AND COMPUTERS IN SIMULATION.
1,
2
(2024)
SEP-AlgPro: An efficient allergen prediction tool utilizing traditional machine learning and deep learning techniques with protein language model features.
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES.
133085,
133095
(2024)
ac4C-AFL: A high-precision identification of human mRNA N4-acetylcytidine sites based on adaptive feature representation learning.
MOLECULAR THERAPY NUCLEIC ACIDS.
1
(2024)
H2Opred: a robust and efficient hybrid deep learning model for predicting 2’-O-methylation sites in human RNA.
BRIEFINGS IN BIOINFORMATICS.
1,
25
(2024)
Advancing the accuracy of SARS-CoV-2 phosphorylation site detection via meta-learning approach.
BRIEFINGS IN BIOINFORMATICS.
25,
1
(2024)
RDR100: A Robust Computational Method for Identification of Krüppel-like Factors.
CURRENT BIOINFORMATICS.
19,
6
(2024)
Unveiling local and global conformational changes and allosteric communications in SOD1 systems using molecular dynamics simulation and network analyses.
COMPUTERS IN BIOLOGY AND MEDICINE.
168,
107688
(2023)
Stack-DHUpred: Advancing the accuracy of dihydrouridine modification sites detection via stacking approach.
COMPUTERS IN BIOLOGY AND MEDICINE.
169,
1
(2023)
ADP-Fuse: A novel two-layer machine learning predictor to identify antidiabetic peptides and diabetes types using multiview information.
COMPUTERS IN BIOLOGY AND MEDICINE.
165,
1
(2023)
Protection of c-Fos from autophagic degradation by PRMT1-mediated methylation fosters gastric tumorigenesis.
INTERNATIONAL JOURNAL OF BIOLOGICAL SCIENCES.
19,
12
(2023)
Hybrid data augmentation and deep attention-based dilated convolutional-recurrent neural networks for speech emotion recognition.
EXPERT SYSTEMS WITH APPLICATIONS.
230,
(2023)
Identification of SH2 domain-containing proteins and motifs prediction by a deep learning method.
COMPUTERS IN BIOLOGY AND MEDICINE.
162,
(2023)
Ensemble feature selection using Bonferroni, OWA and Induced OWA aggregation operators.
APPLIED SOFT COMPUTING.
143,
(2023)
VirPipe: an easy-to-use and customizable pipeline for detecting viral genomes from Nanopore sequencing.
BIOINFORMATICS.
39,
5
(2023)
DrugormerDTI: Drug Graphormer for drug-target interaction prediction.
COMPUTERS IN BIOLOGY AND MEDICINE.
161,
1
